https://github.com/vhf/free-programming-books/blob/master/free-programming-books.md

http://vislab-ccom.unh.edu/~schwehr/rt/

It covers R, Python, the shell, GiS and editors.

http://vislab-ccom.unh.edu/~schwehr/rt/

It covers R, Python, the shell, GiS and editors.

Kaitlin Thaney, the director of the Mozilla Foundation’s Open Science Lab spoke to my database class about her vision for science to be as open as
software. Mozilla incubated Software Carpentry which runs two […]

Also a reminder, the python community is friendlier than most other communities on the web. The Django […]

What is Django?

Django is an open source web application framework based on Python. A web application framework is a series of programs that help people write web services. A web service is a stand alone […]

https://github.com/CSCI391/homework1

🙂

The NY Linux Users Group is going to be at CCNY tomorrow night. Come check out FREE software. “You
have nothing to lose but your chains!”

This is a peer-supported workshop where we get together to share current challenges and approaches to solving problems or just work alongside like-minded individuals and learn through…[Read more]

Thanks

🙂

Open Education
==============

Open Education is a term to describe the use of freely transferable
educational resources
([https://wiki.creativecommons.org/What_is_OER%3F] and…[Read more]

Open Education is a term to describe the use of freely transferable educational resources (https://wiki.creativecommons.org/What_is_OER%3F and http://en.wikipedia.org/wiki/Open_education). These materials and their use predate both invention (1968) and widespread consumer and commercial use of the internet (1994). However, with the adoption of the Internet and the increasing availability of valuable educational resources distributed in much the same way as FREE and Open Source Software (FOSS), the movement has gained significant institutional backing, materials and momentum.

City University of New York

Today’s City University of New York dates back to the 1847 founding of the Free Academy by Townsend Harris, an early champion of public education and a pioneering diplomat who was the United States’ first ambassador to Japan. With an inaugural class of 143 academically qualified young men, the Academy set upon a mission to, in Harris’ words, “let the children of the rich and the poor take their seats together and know of no distinction save that of industry, good conduct, and intellect.” The Academy quickly grew in reputation and enrollment and, as a new century approached, plans were approved for an expansive neo-Gothic campus uptown for what became known as the College of the City of New York. Twenty years after the first young men entered the Academy, a separate school for the education of teachers, the Female Normal and High School, later renamed Hunter College in honor of its founder Thomas Hunter, offered the same higher education opportunities to women. (http://www.cuny.edu/about/history.html)

The University includes eleven senior colleges, seven community colleges, The Macaulay Honors College and five graduate and professional schools, located throughout the city’s five boroughs.

CUNY GC was founded in 1961 to primarily concentrate on the awarding of doctoral degrees. The GC quickly expanded from 4 to 27 programs. It currently offers 42 different PhD degrees. The Earth and Environmental Sciences boasts a world renowned scholar on incarceration, Dr. Ruthie Gilmore (http://www.gc.cuny.edu/Faculty/Core-Bios/Ruth-Wilson-Gilmore) and the LIS Center (http://www.gc.cuny.edu/liscenter) whose mission is to explicitly study inequality.

Open Education at CUNY

Clearly the institutional mission of CUNY and Open Education have much in common. There have been some pioneering efforts in FREE software and Open Education at CUNY and much more to come. Their are two flavors of CUNY’s contributions. First CUNY professors, administrators and students contribute to and maintain FOSS projects. Second CUNY professors and administrators make public Free Educational Resources which are not FREE software.

Also there are projects that have their nexus at the Graduate Center and a wide variety of projects in the public interest which occur outside of the GC. I am writing about the ones I know. I am hoping that this group can correct my inevitable oversights and omissions. Most of the projects at the Graduate Center I describe are programs with whom I am lucky enough to have had some interaction. To find the programs at other colleges, I searched for the college name along with linux, FREE software and Open Source. Apologies for any omissions.

Reproducible research

Producing new knowledge compels us to include another emerging movement in education, that of Reproducible Research. To define yet another term, this is the ability to reproduce published results. There are some fairly shocking data on how much of current research are not reproducible. In 2012, a survey done for Nature found that 47 out of 53 medical research papers on the subject of cancer were irreproducible (http://www.nature.com/nature/journal/v483/n7391/full/483531a.html).

Researchers explained in a 2006 study that, of 249 data sets from American Psychology Association (APA) empirical articles, 73% of contacted authors did not respond with their data over a 6-month period. (http://www.ncbi.nlm.nih.gov/pubmed/17032082)

Elements of reproducible research

using research code that can be inspected
publishing all code that manipulates data
giving access to data that is used produce any published figures
giving specifications for any library configuration
making available any sensor data that was used to create data

Free Software

‘Free software’ means software that respects users’ freedom and community. Roughly, it means that the users have the freedom to run, copy, distribute, study, change and improve the software. Thus, “free software” is a matter of liberty, not price. To understand the concept, you should think of “free” as in “free speech,” not as in “free beer”.

The freedom to inspect and improve the source code is crucial to the

educational and research mission of a world class university.

Scheduled talk

I, Evan Misshula http://EvanMisshula.github.io will be giving a public talk specifically covering a tool for reproducible research on November 5, 2014 http://www.meetup.com/New-York-Emacs-Meetup/events/211960922/

Free Software projects at the GC

Commons in a box

The CUNY Academic commons contributes to FREE Software by developing and maintaining the Commons in a box platform (http://commonsinabox.org) which creates a WordPress social network. Developers from the CUNY Academic commons have contributed features and bug fixes which have been incorporated upstream at both WordPress Plugins and BuddyPress.

Open CUNY

Mission

OpenCUNY, the student-governed, open source, academic medium for The Graduate Center, CUNY community, where you can build the website of your dreams through a WordPress interface (http://opencuny.org/blog/).

Current initiative

In order to help OpenCUNY assess the current usages of OpenCUNY and plan for its next five years, they have launched OpenCUNY’s First Participant Survey here. Whether or not you’re on OpenCUNY, we encourage you to take 10-15 minutes of your time and share about your experience on digital platforms.

CUNY Institute for Software Development

CISDD’s mission is to promote economic development in New York City and encourage the growth of the New York software industry. CISDD was created by the Board of Trustees, as part of CUNY’s economic development initiative, in January of 2000. CISDD provides the software industry, as well as CUNY faculty and students, with opportunities to learn about cutting-edge software products and methodologies.

CISDD is particularly interested in promoting work on core and new software technologies, including: operating system enhancements, server-side software, Linux, security issues with software, distributed computing, logic and visualization. (http://www.cisdd.org/about.php)

Free research code

The research labs of at least four professors of Computer Science make regular contribution to FOSS projects.

The Discrete Imaging and Graphics Group

Led by Professor Gabor T. Herman this group has developed SNARK09 (http://www.dig.cs.gc.cuny.edu/software/snark09/) which is a programming system for the reconstruction of 2D images from 1D projections. It is designed to help researchers interested in developing and evaluating reconstruction algorithms. In the area of image reconstruction, researchers often desire to compare two or more reconstruction techniques and assess their relative merits. SNARK09 provides a uniform framework in which to implement algorithms and evaluate their performance. SNARK09 has been designed to treat both parallel and divergent projection geometries and can create test data for use by reconstruction algorithms. A number of frequently used reconstruction algorithms are incorporated.

Big Spatial Data

Jiangting Zhang has a series of online demos and research codes in the exciting interactive spatial data visualization and parallel computation (http://www-cs.engr.ccny.cuny.edu/~jzhang/LabSoftDemos.htm).

Pattern recognition

Computer Science Executive Officer has numerous research publications and teaching materials available on http://haralick.org. Research code for his cutting edge linear and non-linear manifold clustering algorithm is available at https://github.com/wildart/LMCLUS.jl and https://github.com/wildart/ManifoldLearning.jl.

Data Visualization

Recent faculty addition Lev Manovich has released two new important visualizations in 2014, SelfieCity and The Exceptional and the Everyday: 144 hours in Kiev. Selfie City (http://selfiecity.net) investigates the style of self-portraits (selfies) in five cities across the world. In an important step toward reproducitbility, the interactive selfiexploratory allows you to navigate the whole set of 3200 photos. In the The Exceptional and the Everyday: 144 hours in Kiev (http://www.the-everyday.net) uses computational and data visualization techniques to explore 13,208 Instagram images shared by 6,165 people in the central area of Kiev during 2014 Ukrainian revolution (February 17 – February 22, 2014). All photos and their metadata are available on the site.

GC Digital Fellows workshops

There are a free series of workshops open to the CUNY GC community many of which concentrate on building open educational resources. The schedule is available at https://digitalfellows.commons.gc.cuny.edu/workshops/. These include workshops on Wordpress, Python, command line tools, git and data visualization.

Based in the GC Digital Scholarship Lab, the GC Digital Fellows Program operates as an in-house think-and-do tank for digital projects, connecting Fellows to digital initiatives throughout The Graduate Center. Digital Fellows utilize a team-based approach as they explore creative solutions for projects that can be implemented in a collaborative fashion. In the process, the Program helps build out “The Digital GC” – a vision of the Graduate Center that incorporates technology into its core research and teaching missions. Their reflections on this process can be found on their blog, Tagging the Tower (https://digitalfellows.commons.gc.cuny.edu/category/tagging-the-tower/)

Institutionally supported student initiatives

There were two student projects that came out of the Digital Praxis seminar

Social Paper

The Social Paper won a Digital Humanities start up grant in 2013. The project aims to create a social network that allows graduate students to share seminar papers, enabling students to collaborate and facilitate conversations across the disciplines. – See more at: http://www.gc.cuny.edu/News/GC-News/Detail?id=24347#sthash.otXe34Ib.dpuf

DH Box

Ready-to-go configurations of Omeka, NLTK, IPython, R Studio, and Mallet live in DH Box. Through this praxis friendly environment, professors and students have instant classroom access to a cadre of gold-standard DH tools. Professors will be able to launch a DH computer lab in just a few minutes and guarantee their students an ideal environment for hands-on learning. (http://dhbox.org/about/)

This is accomplished by making a linux computing environment available over the web. Behind the scenes DH Box uses Docker () to allow multiple users and non-overlapping directory structures.

Free Software project not at the CUNY GC

City College

City College has become the host of the New York Linux Group. Their next meeting is August 21 (http://www.meetup.com/nylug-meetings/events/213604362/)

Hunter college

Carson Farmer (http://carsonfarmer.com/research/) has contributed to a number of Graphical Information System programs including GeoPandas (https://github.com/cfarmer).

John Jay

John Jay hosts NYC4Sec(http://www.meetup.com/NYC4SEC/) which is a computer security and forensics meetup in NYC. A number of its members have made contributions to the Volatility Project(https://code.google.com/p/volatility/).

Open educational resource

Journal of Interactive Teaching and Pedagogy

The CUNY Graduate Center is home to Journal of Interactive Teaching and Pedagogy. JiTP’s mission is to promote open scholarly discourse around critical and creative uses of digital technology in teaching, learning, and research. Educational institutions have often embraced instrumentalist conceptions and market-driven implementations of technology that overdetermine its uses in academic environments. Such approaches underestimate the need for critical engagement with the integration of technological tools into pedagogical practice. JITP endeavors to counter these trends by recentering questions of pedagogy in our discussions of technology in higher education. The journal will also work to change what counts as scholarship—and how it is presented, disseminated, and reviewed—by allowing contributors to develop their ideas, publish their work, and engage their readers using multiple formats. (https://jitp.commons.gc.cuny.edu/about-the-journal/)

Futures Initiative

Another exciting new open educational resource is the Futures Initiative (https://futures.commons.gc.cuny.edu). The Futures Initiative is dedicated to creating and inspiring new methods of interdisciplinary and collaborative learning and pedagogy in order to stimulate institutional changes in higher education. Drawing upon and catalyzing the energy of CUNY faculty and students, the Futures Initiative seeks to explore new models for empowering the next generation of college professors to teach and engage in research most effectively in our modern age. The Futures Initiative encourages peer-to-peer pedagogies that support open and connected forms of learning, experimentation, and multimedia publication. Housed at the Graduate Center and extending throughout the CUNY system, the Futures Initiative serves as a model for innovation and aims to inspire public reinvestment in higher education and in our collective future as a society.

One of the many innovative projects is a new course on the Future of Higher Ed taught by Futures Initiative Director Dr. Cathy N. Davidson and former CUNY-GC President William Kelley. The course has a public collaborative syllabus (https://docs.google.com/document/d/1hlbAHk_7GQ0o0pTJCozROya956M1CXYeChBPuBpyqsI/edit). Information about the course and open materials are available at (https://futures.commons.gc.cuny.edu/2014/10/05/crowdsourced-syllabus-mapping-the-futures-of-higher-education-teaching-learning-and-research-in-the-age-of-google/)

Open educational projects not at the CUNY GC

Baruch college

There is a Free and Open Source blog that has started at Baruch (http://blogs.baruch.cuny.edu/foss/). Baruch also has a detailed guide to using Open Source mapping software (http://www.baruch.cuny.edu/geoportal/practicum/).

Macaulay honors college

The Macaulay Honors College has produced a series of videos and a website (http://macaulay.cuny.edu/eportfolios/scienceforward/videos/) which informs citizens on scientific issues. This was highlighted on this group just yesterday (https://commons.gc.cuny.edu/groups/open-education-at-cuny/forum/topic/new-science-oer/).

Brooklyn College

Samir Chopra, a military historian wrote a relatively early treatment of the philosophical implications of FREE software. It is available at http://epicenter.media.mit.edu/~mako/foss-reading/DLbook.pdf

College of Staten Island

Professor Roy Vanegas has made his course on Web Design, Graphics, & Theory available on the web as an Open Educational Resource (http://roy.vanegas.org/teaching/at_csi/com_370/). Michael Mandberg co-authored a FREE book about Media Design using the Adobe Creative Suite (http://digital-foundations.net/). The book is from 2009, and was the first CC licensed book put out by Pearson, and the first (and maybe still only) design text under a CC license.

Also, The Social Media Reader is available under its CC license https://archive.org/details/TheSocialMediaReader

And Professor Mandberg has written about my use of CC and work in Free Culture in his chapter in TSMR.

Queens College

Queens College of the City University of New York announced May 14, 2014 that Douglas Rushkoff, the famed cyberculture expert who originated concepts such as “viral media” and “social currency,” will be joining its faculty. This marks the first full-time academic role for the prolific media theorist, award-winning author, and documentarian, who is considered one of the most influential thinkers of the digital age. Starting this August, he will help lead the development of a new Master of Arts in Media Studies program that will address the technological and market forces that dominate our daily lives.

His book titled Open Source Democracy is available here (http://www.rushkoff.com/open-source-democracy/).

Open Education is a term to describe the use of freely transferable
educational resources
([https://wiki.creativecommons.org/What_is_OER%3F] and
[http://en.wikipedia.org/wiki/Open_education]). These materials and
their use predate both invention (1968) and widespread consumer and
commercial use of the…[Read more]

Open Education is a term to describe the use of freely transferable
educational resources
([https://wiki.creativecommons.org/What_is_OER%3F] and
[http://en.wikipedia.org/wiki/Open_education]). These materials and
their use predate both invention (1968) and widespread consumer and
commercial use of the…[Read more]